BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H06SP1|AL429966
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1161 0.0
>3x_Contig1461
Length = 5478
Score = 1161 bits (569), Expect = 0.0
Identities = 706/760 (92%), Gaps = 9/760 (1%)
Strand = Plus / Plus
Query: 5 ttcagacctaaaattcaacactgttctgccacattattccttgcatgaaataagagcagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 ttcagacctaaaattcaacactgttctgccacattattccttgcatgaaataagagcagc 3078
Query: 65 agcattacaacatgagcaactgtacatctacacgagcagtattatwcttcttcgttttga 124
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3079 agcattacaacatgagctactgtacatctacacgagcagtattattcttcttcgttttga 3138
Query: 125 cataataawaattgtdttagawcmcagagawagttcttcaatcgaagtagtctcwagaat 184
|||||||| |||||| ||||| | |||||| ||||||||||||||||||||||| |||||
Sbjct: 3139 cataataataattgttttagatcccagagatagttcttcaatcgaagtagtctctagaat 3198
Query: 185 tgcattgctccctgttcgttttttgtatcttgtttccawatcatgcatctwtctacactg 244
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 3199 tgcattgctccctgttcgttttttgtatcttgtttccatatcatgcatctttctacactg 3258
Query: 245 tttgactwawatdwcatgtacttaacccwaaawrctcttcatttgtaattgtwtttdatc 304
||||||| | || |||||||||||||| ||| |||||||||||||||||| ||| |||
Sbjct: 3259 tttgacttatatttcatgtacttaaccctaaattctcttcatttgtaattgttttttatc 3318
Query: 305 ccaaccacwaaatggatgtatttgaggattcatccttcwagaacaaatcacaactttwaa 364
|||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||
Sbjct: 3319 ccaaccactaaatggatgtatttgaggattcatccttctagaacatatcacaacttttaa 3378
Query: 365 ggtgtaaatgtaaaawdgcatttcaaawaagtmatttcattaatgawacgttcgcatatc 424
||||||||||| ||| |||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 3379 ggtgtaaatgttaaattgcatttcaaataagtcatttcattaatgatacgttcgcatatc 3438
Query: 425 atcacacagtttaggaacacattatcactgtacccgctgctttattcaatttatcatcga 484
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3439 atcacacagtttaggaacacattatcactgttcccgctgctttattcaatttatcatcga 3498
Query: 485 agtatctttctcttttctatatctgartttgagtttttgcatgtgtttcaaagtattggg 544
|||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 3499 agtatctttctcttttctatatctgatttttagtttttgcatgtttttcaaagtattggg 3558
Query: 545 agarccggtatgaaaaagaaaaaaaactatacatcccacaagaagccaattataaaaaaa 604
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3559 agatccggtatgaaaaataaaaaaaactatacatcccacaagaagccaattataaaaaaa 3618
Query: 605 taaaaaaataaaaaaataaaaaaatgaaaaaatgaaaaagtgaaaaataacttgaaaaaa 664
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 3619 taaaaaaataaaaaaataaaaaaatgaaaaaatgaaaaaatgaaaaataa-ttgaaaaaa 3677
Query: 665 tatagyctaasc-aacaataaacgtacscta-cccactycmtaaataaagttggcct-ac 721
|||| |||| | ||||||||| || ||| |||||| | |||||||| ||||||| ||
Sbjct: 3678 tata-tctaagcaaacaataaa-gttagctagcccacttcctaaataaa-ttggcctaac 3734
Query: 722 aacatactacaacccgtaag-cangcacaactactaccac 760
|||||||||||| ||||||| || |||||||||||||||
Sbjct: 3735 aacatactacaa-ccgtaagccagacacaactactaccac 3773
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8420
Number of Sequences: 1807
Number of extensions: 8420
Number of successful extensions: 745
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 16
effective length of query: 752
effective length of database: 10,329,639
effective search space: 7767888528
effective search space used: 7767888528
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.4 bits)